BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B11SP1|AL425080
(664 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1230 0.0
>3x_Contig1604
Length = 15703
Score = 1230 bits (620), Expect = 0.0
Identities = 627/628 (99%), Gaps = 1/628 (0%)
Strand = Plus / Minus
Query: 1 gatcacctgcgaaataaccgtgatacatttctaaatatttatccgtttttatagattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6592 gatcacctgcgaaataaccgtgatacatttctaaatatttatccgtttttatagattata 6533
Query: 61 tagcccatactttctaaacaaatttactcttgtcgaaccttcaggacttgtctaaaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6532 tagcccatactttctaaacaaatttactcttgtcgaaccttcaggacttgtctaaaaggg 6473
Query: 121 agtgtgataagaaatggtttgcttcaatttaatgacaatttttttgtcatggatatgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6472 agtgtgataagaaatggtttgcttcaatttaatgacaatttttttgtcatggatatgtgt 6413
Query: 181 tgattggattagagatcggagttttcgttgataacgaatgcgctaaaaaaggtcttgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6412 tgattggattagagatcggagttttcgttgataacgaatgcgctaaaaaaggtcttgctc 6353
Query: 241 cctctttctctgtatgctaatgtttcgattgagaaactttgaatttcgagtttcatagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6352 cctctttctctgtatgctaatgtttcgattgagaaactttgaatttcgagtttcatagga 6293
Query: 301 aaatgtacttcaataaaccaaataagctcaggctgactacaaccagaaatatagtgtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6292 aaatgtacttcaataaaccaaataagctcaggctgactacaaccagaaatatagtgtgta 6233
Query: 361 aacaaaatgcatcaagtgaagtcattaaataaaagggaagatgggatataataaacccag 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6232 aacaaaatgcatcaagtgaagtcattaaataaaagggaagat-ggatataataaacccag 6174
Query: 421 tatagattcttcacgaaatcagccaacttttctcctatgccaccacgcgacatctgctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6173 tatagattcttcacgaaatcagccaacttttctcctatgccaccacgcgacatctgctga 6114
Query: 481 ttagtcggtgtgtaaatcatagtccctcgagacttcttgtatggttcataaatcttttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6113 ttagtcggtgtgtaaatcatagtccctcgagacttcttgtatggttcataaatcttttct 6054
Query: 541 gcagccattgtctacctttttcttatcttcagcgtattcccttctataagtcaaaattga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6053 gcagccattgtctacctttttcttatcttcagcgtattcccttctataagtcaaaattga 5994
Query: 601 ctccagtgtagtttagttcaatgttaca 628
||||||||||||||||||||||||||||
Sbjct: 5993 ctccagtgtagtttagttcaatgttaca 5966
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4868
Number of Sequences: 1807
Number of extensions: 4868
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 664
length of database: 10,358,551
effective HSP length: 16
effective length of query: 648
effective length of database: 10,329,639
effective search space: 6693606072
effective search space used: 6693606072
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)